Aplysia RNA-seq Assembly utilities
Current IGS transcriptome statistics
| Transcripts from all tissues | 1,662,821 |
| Transcript clusters (95% identity) | 591,281 |
| Clusters where seed >= 350bp | 329,983 |
| Average seed length | 1172 bp |
| Median seed length | 727 bp |
* Clusters were generated using Uclust. The seeds are the longest transcript in each cluster.
Links
Web-based BLAST form (2014 assemblies)
Transcript lookup utility (2014 assemblies)
Transcript relative abundance (2014 assemblies)